bx.bbi.cirtree_file module

class bx.bbi.cirtree_file.CIRTreeFile

Bases: object

attach(file)

Attach to an open file

find_overlapping_blocks(chrom_ix, start, end)

r_find_overlapping(level, index_file_offset, chrom_ix, start, end, rval, reader)

r_find_overlapping_leaf(level, chrom_ix, start, end, rval, child_count, reader)

r_find_overlapping_parent(level, chrom_ix, start, end, rval, child_count, reader)