bx.intervals.operations package
Submodules
- bx.intervals.operations.base_coverage module
- bx.intervals.operations.complement module
- bx.intervals.operations.concat module
- bx.intervals.operations.coverage module
- bx.intervals.operations.find_clusters module
- bx.intervals.operations.intersect module
- bx.intervals.operations.join module
- bx.intervals.operations.merge module
- bx.intervals.operations.quicksect module
- bx.intervals.operations.subtract module
Module contents
High level operations on genomic intervals. Most accept and produce iterables of bx.io.inervals.io.GenomicInterval objects.
- bx.intervals.operations.bits_clear_in_range(bits, range_start, range_end)
Yield start,end tuples for each span of clear bits in [range_start,range_end)
- bx.intervals.operations.bits_set_in_range(bits, range_start, range_end)
Yield start,end tuples for each span of set bits in [range_start,range_end)