bx.arrays package

Submodules

• bx.arrays.array_tree module
  • ArrayTree
    • ArrayTree.block_size
    • ArrayTree.dtype
    • ArrayTree.from_file()
    • ArrayTree.from_sequence()
    • ArrayTree.levels
    • ArrayTree.max
    • ArrayTree.no_leaves
    • ArrayTree.root
    • ArrayTree.set_range()
    • ArrayTree.to_file()
  • FileArrayTreeDict
    • FileArrayTreeDict.dict_to_file()
  • array_tree_dict_from_reader()
• bx.arrays.array_tree_tests module
  • TestArrayTree
    • TestArrayTree.setUp()
    • TestArrayTree.test_big()
    • TestArrayTree.test_get_frequencies()
    • TestArrayTree.test_get_leaf()
    • TestArrayTree.test_get_summary()
    • TestArrayTree.test_higher_level_than_tree()
    • TestArrayTree.test_wrong_dictkey()
• bx.arrays.bed module
  • BedReader
• bx.arrays.wiggle module
  • WiggleReader
  • parse_header()

Module contents

Classes for working with arrays of data.