bx-python

Contents:

  • Application Documentation
    • bx package
      • Subpackages
        • bx.align package
        • bx.arrays package
        • bx.bbi package
        • bx.cookbook package
        • bx.intervals package
        • bx.intseq package
        • bx.misc package
        • bx.motif package
        • bx.phylo package
        • bx.pwm package
        • bx.seq package
        • bx.tabular package
      • Submodules
      • Module contents
    • bx_extras package
bx-python
  • lib
  • bx package
  • bx.phylo package
  • View page source

bx.phylo package

Submodules

  • bx.phylo.newick module
    • Edge
      • Edge.pretty()
    • NewickParser
      • NewickParser.parse_string()
    • Tree
      • Tree.pretty()
  • bx.phylo.newick_tests module
  • bx.phylo.phast module
    • TreeModel
      • TreeModel.from_file()
  • bx.phylo.phast_tests module
    • test_parser()

Module contents

Phylogenetic file format support.

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© Copyright 2005-2019, James Taylor; 2019-2023, Nicola Soranzo.

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